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Faculty of Life Science, Department of Bioscience
- Professor
- Takeru NAIKI
- Research Field
Biomedical Engineering, Biomechanics, Regenerative Medical Engineering
- Keyword(s)
Tissue Engineering, Muscle Hypertrophy, Blood Flow, Mechanical analysis, Ozone Water
- Research theme
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- Developmet the cultured thick and huge tissue
- Mechanisms of muscle hypertrophy with Kaatsu traning
- Development of high-performance technologies for hemodialysis
- Prolongation of antiseptic property of Ozone by freezing
Outline of research activitiesThe aim of the one of my research is to develop the cultured thick and huge musclular tissue. To do this, I am developing the blood vescle in cultured tissues by using selfaggregation technique.
I am studying the mechanisms of muscular hypertrophy by Kaatsu training (pressurized muscle training) in cellular level to develop the method to treat musclular atrophy etc. Also I am studying the effects of physical environments (temperature, air contact, and ultrasonic wave irratiation, etc.) around blood in extracorporeal circulation devices such as artificial carcdiopulmonary device or dialysis cdevice on blood coagulation to develop the high-performance extracorporeal blood circulation device.- Desired cooperation
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- Development of regenerative medical engineering techniques
- Development of bioengineering equipments including medical devices
- Elusidation of mechanisms of occurrence of circulatory or musculoskeletal disorder and development of method of treatment
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Faculty of Life Science, Department of Bioscience
- Professor
- Yoshiko MINAMI
- Research Field
Molecular biology, Biochemistry
- Keyword(s)
Protein, Cell, Metabolic pathway
- Research theme
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- Analysis of the indican metabolic pathway from an indigo plant, Polygonum tinctorium.
- Analysis of unique proteins from a true slime mold, Physarum polycephalum.
- Analysis of secretory pectolyase from the fungi, Aspergillus japonicus.
Outline of research activitiesI study the biosynthetic pathway of indican (a precursor of indigo). As an application, I attempt the mass production of indigo in E. coli.
I analyze the intracellular function of several unique proteins from a slime mold.
- Desired cooperation
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- Production and utilization of indigo dye.
- Research on the character of true slime mold.
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Atsuhito KUBOKI
- Research Field
Synthetic organic Chemistry, Bioorganic chemistry
- Keyword(s)
Organic reaction, Enzymatic reaction, Bioactive compound
- Research theme
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- Development of Development of new synthetic methodologies of ο-quinones
- Studies on chemo-enzymatic processes for fine chemicals
Outline of research activitiesOur group is interested in developing new synthetic methodologies to enable synthesis of biologically active natural compounds and their derivatives in environmental friendly manner. As such manners, we have developed metal-free regioselective cycloaddition of highly reactive o-quinone to form 1,4-benzodioxane and a procedure for construction of benzene ring from o-quinone and terminal alkynes through cycloaddition and photo-decarboxylation. We have also reported concise synthetic route to KDO, a kind of carbohydrate, including elimination of cyclic sulfite as a key step. By collaborative research with a company, functional monomers for dental adhesive resin cements have been developed.
- Desired cooperation
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- Development of fine chemicals by analogue synthesis
- Partial modification of lead compound
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Midori FUTAMI
- Research Field
Protein engineering
- Keyword(s)
Protein chemistry, Funactional regulation of mammalian cells, Blood purification
- Research theme
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- Artificial regulation of mammalian cells by protein transduction technology.
- Development of plasma adsorption column using protein ligand.
Outline of research activitiesDenatired protein forms insoluble aggrigate. Chemical cationization of decatured protein s them water soluble. Based on this protein cationization method, we have studied two theme as described later. Left panel shows the outline of cationized protein transduction for living mammalian cells。Cationized protein efficiently adosorbed to negatively charged cell surface and uptaked by endocytosis. Right panel shows application of cationized protein for adosorbent of autoantibody. Denatured and cationized whole antigen immobilized on adsorber would be possible to capture antibodies with various epitope.
- Desired cooperation
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- Production of recombinant protein by the host of E.coli or mammalian cell.
- Protein analysis.
- Mammalian cell regulation.
- Development of plasma adsorption column using protein ligand.
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Ryosuke TADOKORO
- Research Field
Cell biology, Developmental biology, Cosmetology
- Keyword(s)
Melanin, Organelle, Intercellular transport, Skin
- Research theme
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- Molecular and cellular mechanisms underlying melanosome transfer during skin pigmentation
- Skin biology
- Cosmetics
Outline of research activitiesAnimals including humans have beautiful pigments on the body surface. In the pigmentations, melanosomes, specialized organelles for melanin generation, are synthesized in pigment cells called melanocytes and subsequently transferred from melanocytes to surrounding skin and hair keratinocytes. Although to understand melanosome transfer is important for developing cosmetics and pigment biology, molecular and cellular mechanisms of melanosome transfer have long been unclear.
I recently established a novel live imaging technique that enabled to directly analyze melanosome transfer in skin tissue using chicken embryos.I am going to elucidate the whole picture of the intercellular transfer of melanosomes by using the new technique.- Desired cooperation
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- Cosmetology
- Skin biology
- Developmental biology, Regeneration engineering、Computer simulation
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Shinji KAWANO
- Research Field
Molecular biology, Molecular genetics
- Keyword(s)
Chromatin structure, Nuclear RNA, Topoisomerase
- Research theme
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- Functional analysis of type II DNA topoisomerase
- Regulation of nuclear dynamics
Outline of research activitiesType II DNA topoisomerase (topo II) is an essential enzyme for resolution of topological problems arising in DNA metabolic processes such as transcription and replication. We study a role of the C-terminal domain of topo II in its nuclear dynamics and enzymatic activities.
- Desired cooperation
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- Development of functional RNA
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Takahiro HAMADA
- Research Field
Plant Physiology, Cell Biology
- Keyword(s)
Cytoskeleton, microtubule, RNA granule
- Research theme
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- Mechanism of microtubule regulation in plants
- Mechanism of environmental responses in plants
- Mechanism of small RNA in plants
Outline of research activitiesThrough advanced imaging techniques, biochemistry, and gene expression analyses, I work to understand the mechanisms of how plants adapt to changes in the environment.
(1) Mechanisms of Plant Motion and Growth Many people believe that plants do not move. However, the reality is that plants respond by sensing changes in light intensity, color, and temperature and moving. I focus on the behavior of microtubules in plant cells, which may be playing a key role in regulating plant motion and growth. This project tries to answer this classic, unanswered question in plant physiology, one that had been a focus of Charles Robert Darwin (1809-1882), the Father of Evolution.
(2) Mechanisms of Plant Environmental Responses To adapt to environmental change, plants must survive and reproduce through seed production because they cannot physically leave the place where their seeds germinate. In particular, my focus is on how plants adapt to higher temperatures. As we face the challenge of climate change and global warming, understanding mechanisms of biological adaptation to higher temperatures is critical.
(3) Functions of Small RNAs on Plant Embryogenesis and Development Small RNAs play important roles to regulate plant embryogenesis and developments. I discovered a novel gene expression mechanism involving small RNAs. This project tries to further develop this new field in plant physiology.
- Desired cooperation
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- Advanced Agriculture
- Studies for plant monitoring and cultivation technologies
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Faculty of Life Science, Department of Bioscience
- Associate professor
- Toshimasa YAMAMOTO
- Research Field
Aquaculture, Fisheries Engineering
- Keyword(s)
The third water, Closed circulation Aqua Culture
- Research theme
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- Aqua Culture using the third water
- Aqua cultured study of a crustacean
- Impact study of the fish by free exchange of breeding water
- Reproduction of the third water quality has deteriorated
Outline of research activities[Overview of research]
We studied the marine fish of aqua culture that does not use seawater.
Breeding possible fish species flounder, tiger puffer, striped jack, grouper, Japanese eel, New Guinea eel, blue fin tuna, chum salmon, Kuruma prawn, deman prawn etc.
We aim to gently safe and secure closed aqua culture in the environment at low cost.
These research activities has been attracting attention from the world not only in Japan but.[Acquired patents]
· Patent No. 4665252
· Patent No. 4665258
· Patent No. 5062550
· Patent No. 5364874
· Patent No. 5487377
· Patent No. 5487378
· Patent No. 5578401[International cooperation]
Introduction to the acetic acid injection method( Crown-of-thorns starfish control manual 2011 :Ministry of the Environment)
The Jica Project Study on Value-add Macrobrachium rosenbergii Aquaculture by the Third Water in the Kingdom of Cambodia
- Desired cooperation
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- Closed circulation Aqua Culture
- The development of extensive manner aqua culture technology of shrimp and crab
- Development of nitrate nitrogen removal technology that is discharged from the fish
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Faculty of Life Science, Department of Bioscience
- Lecturer
- Masahiko INOGUCHI
- Research Field
Plant Physiology
- Keyword(s)
Plant tissue culture, Gene regulation, Morphogenesis
- Research theme
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- Stress responsive gene expression
- Emvironmental responses upon flowering and/or gravitropism
- Exploration for novel phytoregulators
Outline of research activitiesPlants can adapt to various environmental conditions by perceiving intensity and quality of light, direction of gravity, and so on. By elucidating such a stimulus-responsive mechanism, we will be able to modulate the growth of a plant to be optimized for an artificial condition such as in a space station or a plant factory.
We are studying on 1) the molecular bases for a wound-responsive gene expression, 2) the effect of light quality on root gravitropism, and 3) a novel plant growth regulator within a distilled extract from industrial waste biomass.- Desired cooperation
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- Improvement of crop traits under stress.
- Plant growth modulation under artificial environmental conditions.
- Exploring novel plant growth regulators from industrial waste biomass.
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Faculty of Life Science, Department of Bioscience
- Lecturer
- Msamitsu MIYANAGA
- Research Field
Environmental dynamics, Environmental ecology
- Keyword(s)
Aqueous Environment, Persistent Organic Pollutants, Fields Research
- Research theme
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- Measurement of environmental pollutants in western Japan area of sea
- Infulueence of a heavy metal to a creature
- Elution of organic matter and nutrient salts from the bottom sediment of Lake Kojima
Outline of research activitiesWe are investigating the dynamics of polycyclic aromatic hydrocarbons in the Seto Inland Sea and other areas of western Japan. In addition, clarifying the mechanism of contamination of Lake Kojima, we are conducting water quality surveys of Lake Kojima and elution experiments of organic matter and nutrient salts from the bottom sediment. We are also investigating the effects of chemical substances on the properties of aquatic organisms.
- Desired cooperation
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- Sampling and analysis in the dynamics survey of environmentally hazardous substances
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Faculty of Life Science, Department of Bioscience
- Lecturer
- Satoru YAMAGUCHI
- Research Field
Biochemistry, Biophysics, Protein Science
- Keyword(s)
Taste, protein structure
- Research theme
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- Taste-converting proteins
- Taste modifiers
Outline of research activitiesMy research focuses on elucidating the structure and function of biopolymers involved in the human life sciences. In particular, I focus on the field of human taste perception and study the mechanism of sweet taste perception. I also studies proteins that transform the human sense of taste. Certain proteins have the ability to alter human taste perception (e.g., changing sour taste to sweet). I believe that by elucidating this mechanism, we may be able to change “undesirable tastes” into “desirable tastes.
- Desired cooperation
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- New substances related to taste transformation, etc.
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Faculty of Life Science, Department of Bioscience
- Lecturer
- Yosuke NAGATA
- Research Field
Cell Biology, Biochemistry, Regenerative Medicine
- Keyword(s)
Skeletal muscle, muscle hypertrophy, muscle regeneration, muscle satellite cells
- Research theme
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- Muscle hypertrophy involving cell fusion at high loads
- Mechanisms regulating the initiation of muscle regeneration
- Self-renewal of skeletal muscle stem cells
- Regulation of muscle cell function by sphingolipids
Outline of research activitiesSkeletal muscle is an essential tissue for healthy living, and thus, age-related deterioration of motor function is a major problem. This is related to the fact that skeletal muscles become larger (muscle hypertrophy) or smaller (muscle atrophy) depending on the conditions of use. In addition, the dysfunction of muscle satellite cells causes serious symptoms. By elucidating the molecular mechanisms of skeletal muscle regeneration and muscle hypertrophy, this laboratory aims to contribute to the improvement of quality of life by overcoming the decline in muscle regenerative capacity associated with aging and muscle diseases.
- Desired cooperation
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- Effects of Artificial Functional Regulation of Muscle Satellite Cells on Muscle Regenerative Potential in the Medium to Long Term
- Development of technology for hypertrophy and maturation of muscle fibers in cell culture system
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Faculty of Life Science, Department of Bioscience
- Assistant professor
- Rihito MORITA
- Research Field
Biochemistry, Protein Science
- Keyword(s)
Enzyme, Functionaly Unknown Protein, Desiccation tolerance
- Research theme
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- Molecular Mechanisms of Desiccation Tolerance in Physarum polycephalum
- Functional analysis of Novel Functionaly Unknown Proteins
Outline of research activitiesPhysarum polycephalum can servive in extreme desiccation conditions. Stabilization of biomolecules, including proteins, is essential action for survival in the desiccation condition. To understand the molecular mechanism of desiccation tolerance in Physarum polycephalum, I have researched the whole aspect of adaptation by omics analysis.
- Desired cooperation
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- Expression and purification of useful target proteins
- Stabilization and thermophilization of useful target proteins
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Faculty of Life Science, Department of Bioscience
- Professor
- Keita KANKI
- Research Field
Regenerative Medicine, Tumor Biology
- Keyword(s)
Regenerative Medicine, iPS cells, Liver, Cancer
- Research theme
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- Induction of functional hepatocyte from pluripotent stem cells. Regulation of cell differentiation mechanism in cancer cells.
Outline of research activitiesDevelopment of efficient protocol to induce functional cells from pluripotent stem cells is important for cell therapies. We aim to create highly differentiated somatic cells and functional tissues by using genetic manipulation, 3D-culture, and co-culture methods. We also investigate the regulation mechanism of differentiation in cancer cells which could be useful information for both cancer therapy and regenerative medicine.
- Desired cooperation
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- Artificial organ
- Bioreactor
- Cell source for regenerative medicine
- Cancer therapy
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Akio TAKAHASHI
- Research Field
Vertebrate Paleontology; Archeozoology
- Keyword(s)
Fossils, Skeletal remains, Reptiles, Amphibians, Mammals
- Research theme
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- Cretaceous terrestrial vertebrate faunas
- Turtle evolution; Island paleozoogoegraphy
- Mongolian Dinosaurs
- Museum exibition and education
Outline of research activitiesMy researches focus on evolution of terrestrial vertebrates and their paleozoogeography on the basis of skeletal remains or fossils (turtles, lizards, crocodiles, dinosaurs, frogs, carnivoran mammals in particular). To collect those vertebrate remain, we have conducted field excavations in Japan Main Islands, Ryukyu Archipelago, Indonesia, and the Gobi desert of Mongolia every year.
- Desired cooperation
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- Identification of vertebrate skeletal remains/fossils
- Museum exhibition
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Hiroyuki IKETANI
- Research Field
Taxonomy of cultivated plants, Horticulture
- Keyword(s)
Tree, Population Genetics, Cultivar
- Research theme
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- Hybridization between wild and cultivated plants
- Population genetics of wild plants escaped from cultivation
- Genotyping of cultivars
- Nomenclature of cultivated plants
Outline of research activitiesI study hybridization and introgression of wild and cultivated plants using molecular markers. Especially I analyze those the distinction of which from native plants are now difficult due to their naturalizaion in pre-modern times. I also study the distinction and origin of cultivars using molecular genotying. In addition, I study the problems in denomination and nomenclature of cultivated plants as a member of the Internationl Commission for the Nomenclature of Cultivated Plants.
Infrorescence of a tree cultivated as ‘Somei-yoshino’ at the Koshikawa Botanical Gardens, University of Tokyo. I demonstrated that this individual has different genotype from true ‘Somei-yoshino’, the clonallity of the latter cultivar is verified by molecular markers.- Desired cooperation
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- Collection and investigation of crops and cultivated plants
- Conservation and management of wild genetic resources
- Development and utilization of traditional and/or novel crops and cultivated plants
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Keiji NAKAMURA
- Research Field
Biology
- Keyword(s)
Insect, Life history, Seasonal adaptations
- Research theme
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- Experimental analysis of insect life-cycle adaptations
- Analysis of environmental factors affecting animal life cycles
- Studies of of environmental effects on amphibian growth and development
Outline of research activitiesInsects adapt to various terrestrial environments. In temperate regions, to survive cold temperatures in winter is essential for insects. Thus, many insects predict the arrival of period which is not suitable for development and reproduction, and change their physiological state. I am studying how insects regulate the life cycles in response to environmental signals, by field observations and rearing experiments.
- Desired cooperation
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- Preservation of ecosystems
- Experimental analysis of pest's life cycle
- Effects of environmental changes on animal ecology
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Naoki KAMEZAKI
- Research Field
Natural History with a focus on turtle
- Keyword(s)
Sea turtle, Freshwater turtle, Sandy beach, Alien species conservation
- Research theme
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- Natural history of sea turtle
- Conservation biology of marine and freshwater turtle
- Disinfection technology of alien turtle from pond or river
Outline of research activitiesWe are studying the natural history of Japan’s turtle, ecologically, ethologically and genetically. For the sea turtle, we survey the nested turtle on beach and bycaught turtle by fisheries. Furthermore, we study the ecology and disinfection technology of red-eared slider turtle, Trachemys scriputa elegans, that was established in Japan. On the other hand, we monitor relationship between human and domestic animals, such a dolphin or seal, for the animal welfare.
- Desired cooperation
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- Beach maintenance technology which do not effect beach ecosystem.
- Conservation technics for freshwater turtles.
- Study of domestic animals for animal welfare.
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Naoto TOMIOKA
- Research Field
Environmental Archaeology, Palaeoecological anthropology
- Keyword(s)
Environment, Archaeology, Palaeoecology, Anthropology
- Research theme
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- Identification and Analysis on Hard tissues from Archaeological Site
- Shell Growth Line Analysis
Outline of research activitiesIt is able to be defined that Archaeological Animal remains would be a mirror of their environment and subsistence including gathering, hunting and fishing, in these days.
Every animal remains from archaeological sites is suitable to environmental archaeology in this way so it would be required to identify accurately most of all animal remains from every site. Most frequent variety of sponsored research is to identify shellfish and shell growth line analysis. Recently we analyze the oxygen stable isotope ratio and the carbon stable isotope ratio about archaeological shellfish to study palaeoenvironment.- Desired cooperation
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- Identification and Analysis on Hard tissues from Archaeological Site
- Shell Growth Line Analysis
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Faculty of Biosphere - Geosphere Science, Department of Biosphere - Geosphere Science
- Professor
- Naoya FUKUDA
- Research Field
Astronomy, Astronomy Education, Data Visualization
- Keyword(s)
Astronomy Education, Stereoscopic system, MHD simulation
- Research theme
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- Research of triggered star formation
- Desgin of a four-dimensional digital universe theater
- Optical and Infrared Astronomy, Radio Astronomy
Outline of research activitiesFormation of stars like the sun and planets like the earth is one of the important themes of astronomy. We study both theory and observation of star and planet formation. I investigate the star formation triggered by effects of OB stars.
Regarding the astronomy education, I managed the certificate of the astronomy guide at Okayama University of Science and the four-dimensional digital universe theater at Faculty of Biosphere-Geosphere Science.- Desired cooperation
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- Astronomy Education
- Stereoscopic system